Bioinformatics: LSCF Publications

  1. Nevo S., Frenkel N., Kadouri N., Gome T., Rosenthal N., Givony T., Avin A., Peligero Cruz C., Kedmi M., Lindzen M., Ben Dor S., Damari G., Porat Z., Haffner-Krausz R., Keren-Shaul H., Yarden Y., Munitz A., Leshkowitz D., Goldfarb Y. & Abramson J. (2024). Tuft cells and fibroblasts promote thymus regeneration through ILC2-mediated type 2 immune response.  Science Immunology. 2024 Jan 12 , 9 (91).
  2. Sekeresova K. J., Lena F., Catalina D., Shifra B. & Steffen J. (2024). Draft genome of Kazachstania heterogenica var. weizmannii, a commensal fungus of the mouse digestive tract.  Microbiology Resource Announcements. 2024 Mar 19 , .
  3. Nevo S., Frenkel N., Kadouri N., Gome T., Rosenthal N., Givony T., Avin A., Peligero Cruz C., Kedmi M., Lindzen M., Ben Dor S., Damari G., Porat Z., Haffner-Krausz R., Keren-Shaul H., Yarden Y., Munitz A., Leshkowitz D., Goldfarb Y. & Abramson J. (2024). Tuft cells and fibroblasts promote thymus regeneration through ILC2-mediated type 2 immune response.  Science Immunology. 2024 Jan 12 , 9 (91).
  4. Arbel-Goren R., Dassa B., Zhitnitsky A., Valladares A., Herrero A., Flores E. & Stavans J. (2024). Spatio-temporal coherence of circadian clocks and temporal control of differentiation in Anabaena filaments.  mSystems. 2024 Jan 23 , 9 (1).
  5. Stroganov S., Harris T., Alyagor L., Ben Moyal L., Plitman Mayo R., Golani O., Hirsch D., Ben-Dor S., Brandis A., Mehlman T., Kovo M., Biron-Shental T., Dekel N. & Neeman M. (2024). The differential regulation of placenta trophoblast bisphosphoglycerate mutase in fetal growth restriction: preclinical study in mice and observational histological study of human placenta.  eLife. 2024 Feb 5 , 13 .
  6. Kagan Ben Tikva S., Gurwitz N., Sivan E., Hirsch D., Hezroni-Barvyi H., Biram A., Moss L., Wigoda N., Egozi A., Monziani A., Golani O., Gross M., Tenenbaum A. & Shulman Z. (2024). T cell help induces Myc transcriptional bursts in germinal center B cells during positive selection.  Science immunology. 2024 Mar 29 , 9 (93).
  7. Boura-Halfon S., Haffner-Krausz R., Ben-Dor S., Kim J. S. & Jung S. (2024). Tackling Tissue Macrophage Heterogeneity by SplitCre Transgenesis.  . 2024, :481-503.
  8. Sekeresova Kralova J., Donic C., Dassa B., Livyatan I., Jansen P. M., Ben-Dor S., Fidel L., Trzebanski S., Narunsky-Haziza L., Asraf O., Brenner O., Dafni H., Jona G., Boura-Halfon S., Stettner N., Segal E., Brunke S., Pilpel Y., Straussman R., Zeevi D., Bacher P., Hube B., Shlezinger N. & Jung S. (2024). Competitive fungal commensalism mitigates candidiasis pathology.  Journal of Experimental Medicine. 2024 May 6 , 221 (5).
  9. Sekeresova Kralova J., Donic C., Dassa B., Livyatan I., Jansen P. M., Ben-Dor S., Fidel L., Trzebanski S., Narunsky-Haziza L., Asraf O., Brenner O., Dafni H., Jona G., Boura-Halfon S., Stettner N., Segal E., Brunke S., Pilpel Y., Straussman R., Zeevi D., Bacher P., Hube B., Shlezinger N. & Jung S. (2024). Competitive fungal commensalism mitigates candidiasis pathology.  Journal of Experimental Medicine. 2024 May 6 , 221 (5).
  10. Shemi A., Ben-Dor S., Rotkopf R., Dym O. & Vardi A. (2023). Phylogeny and biogeography of the algal DMS-releasing enzyme in the global ocean.  ISME Communications. 2023 Jul 14 , 3 .
  11. Danino Y. M., Molitor L., Rosenbaum-Cohen T., Kaiser S., Cohen Y., Porat Z., Marmor-Kollet H., Katina C., Savidor A., Rotkopf R., Ben-Isaac E., Golani O., Levin Y., Monchaud D., Hickson I. D. & Hornstein E. (2023). BLM helicase protein negatively regulates stress granule formation through unwinding RNA G-quadruplex structures.  Nucleic Acids Research. 2023 Sept 22 , 51 (17):9369-9384.
  12. Dey S., Barkai O., Gokhman I., Suissa S., Haffner-Krausz R., Wigoda N., Feldmesser E., Ben-Dor S., Kovalenko A., Binshtok A. & Yaron A. (2023). Kinesin family member 2A gates nociception.  Cell Reports. 2023 Oct 31 , 42 (10).
  13. Sapoznikov A., Kozlovski S., Levi N., Feigelson S. W., Regev O., Davidzohn N., Ben-Dor S., Haffner-Krausz R., Feldmesser E., Wigoda N., Petrovich-Kopitman E., Biton M. & Alon R. (2023). Dendritic cell ICAM-1 strengthens synapses with CD8 T cells but is not required for their early differentiation.  Cell Reports. 2023 Aug 29 , 42 (8).
  14. Azuri I., Wattad A., Peri-Hanania K., Kashti T., Rosen R., Caspi Y., Istaiti M., Wattad M., Applbaum Y., Zimran A., Revel-Vilk S. & C. Eldar Y. (2023). A Deep-Learning Approach to Spleen Volume Estimation in Patients with Gaucher Disease.  Journal of Clinical Medicine. 2023 Aug , 12 (16).
  15. Dey S., Barkai O., Gokhman I., Suissa S., Haffner-Krausz R., Wigoda N., Feldmesser E., Ben-Dor S., Kovalenko A., Binshtok A. & Yaron A. (2023). Kinesin family member 2A gates nociception.  Cell Reports. 2023 Oct 31 , 42 (10).
  16. de Haan D., Aram L., Peled-Zehavi H., Addadi Y., Ben-Joseph O., Rotkopf R., Elad N., Rechav K. & Gal A. (2023). Exocytosis of the silicified cell wall of diatoms involves extensive membrane disintegration.  Nature Communications. 2023 Jan 30 , 14 .
  17. Levi N., Papismadov N., Majewska J., Roitman L., Wigoda N., Eilam R., Tsoory M., Rotkopf R., Ovadya Y., Akiva H., Regev O. & Krizhanovsky V. (2023). p21 facilitates chronic lung inflammation via epithelial and endothelial cells.  Aging (Albany, NY.). 2023 Apr 15 , 15 (7):2395-2417.
  18. Sapoznikov A., Kozlovski S., Levi N., Feigelson S. W., Regev O., Davidzohn N., Ben-Dor S., Haffner-Krausz R., Feldmesser E., Wigoda N., Petrovich-Kopitman E., Biton M. & Alon R. (2023). Dendritic cell ICAM-1 strengthens synapses with CD8 T cells but is not required for their early differentiation.  Cell Reports. 2023 Aug 29 , 42 (8).
  19. Bigelman E., Pasmanik-Chor M., Dassa B., Itkin M., Malitsky S., Dorot O., Pichinuk E., Kleinberg Y., Keren G. & Entin-Meer M. (2023). Kynurenic acid, a key L-tryptophan-derived metabolite, protects the heart from an ischemic damage.  PLoS ONE. 2023 Aug 24 , 18 (8).
  20. Chen Q., Leshkowitz D., Li H., van Impel A., Schulte-Merker S., Amit I., Rizzoti K. & Levkowitz G. (2023). Neural plate progenitors give rise to both anterior and posterior pituitary cells.  Developmental Cell. 2023 Dec 4 , 58 (23):2652-2665.e6.