Lecture Notes and exercises
Links for interactive python notebook tutorials
Colab notebooks:
- Tutorial exercise 1 - introduction to sympy
- Tutorial exercise 2 - expressing the glucose insulin model in python
- Tutorial exercise 3 - exponential decay
- Tutorial exercise 4 - solving the steady state of the system
- Tutorial exercise 5 - simulating GTT
The lecture notes are actually chapters from a new book we are working on. They are presented here in goolge doc format. Please comment if anything is unclear or if there are typos. This will help us make the book better.
Chapter 1: The insulin circuit
Chapter 2: Dynamical compensation, mutant resistance, and type-2 diabetes
Chapter 2.5: Three laws of physiology
Chapter 3: The stress hormone axis as a two-gland oscillator
Chapter 3.5: The thyroid and its discontents
Chapter 4: Autoimmune diseases as a fragility of mutant surveillance
Chapter 5: Inflammation and fibrosis as a bistable system
Chapter 7: Aging and saturated repair
Chapter 8: Age-related diseases
Chapter 9: Periodic Table of diseases
Chapter 10: Epilog - Simplicity in Systems Medicine